rs35907463 chrX:1392435 A>G
- Sequence
tgtgaaggtcaggccgctgccagt[A/G]cccgagcgggcgggagggcagctg
- ASB in cell types
- breast tumor primary B-CLL cells 22RV1 (prostate carcinoma) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ESR1_HUMAN ANDR_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 3.89 | -0.15 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | 1.64 | -4.37 | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.59 | 0.71 | 2.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Esophagus_Mucosa, Lung, Muscle_Skeletal, Thyroid