rs36067 chr5:149037990 T>G
- Sequence
tgaaggggccctgtggttagacag[T/G]gtgggtagcaggatccaagtacca
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) SEM (childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- CDK9_HUMAN RUNX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | 2.43 | -0.08 | 1.00 | n/a | n/a | |||
| RUNX2_HUMAN | 2.34 | -3.71 | 1.33 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pituitary, Testis, Thyroid