rs36104352 chr8:23520091 A>C
- Sequence
gaacctgaccagagtggagaattg[A/C]tgactattgatttttacagagcag
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- EMSY_HUMAN ZN316_HUMAN MAFG_HUMAN MAFF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EMSY_HUMAN | n/a | 1.83 | 2.50 | n/a | n/a | |||
| ZN316_HUMAN | -0.85 | 1.61 | 2.00 | n/a | n/a | |||
| MAFG_HUMAN | n/a | 1.97 | 2.00 | 2.94 | Concordant | |||
| MAFF_HUMAN | n/a | 3.04 | 1.50 | 4.13 | Concordant | |||
| MAFK_HUMAN | -3.40 | 1.95 | 1.50 | 2.87 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Muscle_Skeletal, Nerve_Tibial, Pancreas, Thyroid