rs36121084 chr1:26500566 C>T
- Sequence
ccattatccggcggaccccaaccc[C/T]tgctcacgtgactcgcccgccacc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) MDA-MB-231-1833 (breast cancer cells, bone-tropic metastatic line) HEK293 (embryonic kidney)
- ASB for transcription factors
- CDN1B_HUMAN ESR2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDN1B_HUMAN | 0.13 | 1.90 | 1.14 | n/a | n/a | |||
| ESR2_HUMAN | 0.03 | 2.57 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid