rs367730417 chr1:90721524 T>C
- Sequence
gagctggtgtttcttcctatcata[T/C]ttaattttgaacgtttctaagggt
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) WA09 (embryonic stem cells) GM02630 (Fanconi anemi) esophagus squamous epithelium
- ASB for transcription factors
- CTCF_HUMAN RING2_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.60 | -0.18 | 1.50 | n/a | No Hit | |||
| RING2_HUMAN | 1.92 | -3.00 | 1.50 | n/a | n/a | |||
| STAG1_HUMAN | 0.91 | -0.90 | 1.17 | n/a | n/a |
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