rs369651 chr3:8971219 T>C
- Sequence
tgggctcgcgctttgagagggaaa[T/C]gcagataggcgatcatcccactca
- ASB in cell types
- T47D (invasive ductal carcinoma) WA01 (H1, human embryonic stem cells) GM12878 (female B-cells lymphoblastoid cell line) OCI-LY7 (diffuse large B-cell lymphoma)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN STAG1_HUMAN FOXP1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.12 | 0.57 | 1.29 | n/a | No Hit | |||
| RAD21_HUMAN | 1.49 | 0.33 | 1.66 | n/a | n/a | |||
| STAG1_HUMAN | 0.53 | 0.13 | 1.00 | n/a | n/a | |||
| FOXP1_HUMAN | 2.28 | -1.76 | 1.00 | n/a | No Hit |
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