ADASTRA v5.1.3
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Bill Cipher
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adastra.autosome.org
rs37233
chr5:65926379
C
>
G
Sequence
gggtgctgctgccgtccggtgtgc[C/G]gggcgcgccggttgcccggaaccc
ASB in cell types
HepG2 (hepatoblastoma)
22RV1 (prostate carcinoma)
breast tumor
ASB for transcription factors
TYY1_HUMAN
ANDR_HUMAN
ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN
-4.25
4.14
1.00
1.7·10
-9
1.00
n/a
No Hit
ANDR_HUMAN
-0.09
3.14
1.00
5.1·10
-3
2.00
n/a
No Hit
ESR1_HUMAN
-1.48
2.50
1.00
0.02
2.00
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)