rs37248 chr5:76721121 G>A
- Sequence
atgcccagtctttaactagttttc[G/A]tgagcacctaggctccccttccat
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ENL_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ENL_HUMAN | 2.18 | -0.43 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), autism, autism with verbal ability, ldl cholesterol change with statins, platelet count, prostate cancer aggressiveness, tetrology of fallot, total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Testis