ADASTRA v5.1.3
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rs37248
chr5:76721121
G
>
A
Sequence
atgcccagtctttaactagttttc[G/A]tgagcacctaggctccccttccat
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
ENL_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ENL_HUMAN
2.18
-0.43
0.01
1.00
1.25
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration (geographic atrophy)
,
autism
,
autism with verbal ability
,
ldl cholesterol change with statins
,
platelet count
,
prostate cancer aggressiveness
,
tetrology of fallot
,
total cholesterol change with statins
GTEx eQTL
Adipose_Subcutaneous
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Left_Ventricle
,
Lung
,
Muscle_Skeletal
,
Nerve_Tibial
,
Testis
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)