rs373121581 chr22:20697428 T>C

Sequence
gtcaaaacgctacccagtgctgac[T/C]aagcctctcaaaccctgttctaag
ASB in cell types
GM18486 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines)
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 3.37 -3.33 2.3·10-61.00 1.25 n/a n/a
CTCF_HUMAN 2.66 n/a 2.3·10-51.00 1.50 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

No data available

Download