rs3735189 chr7:156638860 T>C

Sequence
gacagcaatacaactgccatttca[T/C]gtctgttgctgtttctacattcag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ILF3_HUMAN KDM1A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ILF3_HUMAN -1.86 2.42 1.005.4·10-3 1.50 n/a n/a
KDM1A_HUMAN n/a 2.30 1.009.7·10-3 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin,  hdl cholesterol,  homa-ir,  ldl cholesterol change with statins,  refractive error,  salmonella-induced pyroptosis,  total cholesterol,  triglycerides,  triglycerides change with statins
GTEx eQTL Cells_Cultured_fibroblasts,  Nerve_Tibial,  Thyroid

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