rs373578 chr13:110571088 A>G

Sequence
gaggccgaggcgggcggattacca[A/G]ggtgtgcctataatcccagctact
ASB in cell types
D283 Med (medulloblastoma) SU-DHL-2 (anaplastic large cell lymphoma)
ASB for transcription factors
OTX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN n/a 2.60 1.002.4·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd diastolic blood pressure (dbp) ldl cholesterol change with statins systolic blood pressure (sbp) total cholesterol change with statins
GTEx eQTL Nerve_Tibial Thyroid

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