rs3735799 chr8:140457861 A>G
- Sequence
aagggggtaggagcgagggagaaa[A/G]gaggaaggaggagcgagggagaga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HEK293T (embryonic kidney) macrophages form periferal blood HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXK2_HUMAN E4F1_HUMAN SPI1_HUMAN ZN263_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | -0.02 | 3.52 | 1.50 | n/a | n/a | |||
| E4F1_HUMAN | -0.33 | 3.38 | 1.75 | n/a | n/a | |||
| SPI1_HUMAN | 1.55 | -1.07 | 2.14 | -1.89 | Weak Concordant | |||
| ZN263_HUMAN | -1.72 | 2.77 | 2.00 | 4.94 | Concordant | |||
| CBP_HUMAN | 2.35 | -0.03 | 2.00 | n/a | n/a |
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Motif analysis
