rs374173 chr14:68715402 G>C
- Sequence
cacttgattccactttgcttttta[G/C]ccactatactgtacgcttcctaag
- ASB in cell types
- MDM(monocyte derived macrophages) CD14+ monocytes HCT-116 (colon carcinoma)
- ASB for transcription factors
- TF65_HUMAN STAT1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.76 | n/a | 3.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.99 | -1.33 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.81 | 0.40 | 1.26 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, fasting blood glucose, hdl cholesterol, ldl cholesterol