rs3746126 chr19:3618690 A>C
- Sequence
gcaccccagacagaggcccgcccc[A/C]ctcatccctcccagggcctactgc
- ASB in cell types
- K562 (myelogenous leukemia) MS-1 (Small cell lung carcinoma) HMEC (human mammary epithelial cells) GM17942 (lymphoblastoid cell)
- ASB for transcription factors
- MAFG_HUMAN STAG1_HUMAN KAISO_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MAFG_HUMAN | 3.26 | n/a | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | 0.93 | 0.16 | 1.00 | n/a | n/a | |||
| KAISO_HUMAN | 2.56 | -4.79 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood