rs3757740 chr7:103660749 G>C

Sequence
atttctggaatgacatcagtgaga[G/C]aatatgtaactgtggctcttgttg
ASB in cell types
HepG2 (hepatoblastoma) PC3(bone mets prostate adenocarcinoma)
ASB for transcription factors
ATF2_HUMAN ATF7_HUMAN TEAD3_HUMAN ZNF24_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ATF2_HUMAN 3.66 -3.35 3.7·10-81.00 1.00 n/a No Hit
ATF7_HUMAN 3.27 -2.97 4.1·10-81.00 1.00 n/a n/a
TEAD3_HUMAN 1.78 -1.58 0.011.00 1.00 n/a n/a
ZNF24_HUMAN -1.00 1.92 1.000.03 1.00 n/a n/a
FOXA1_HUMAN 1.56 -0.09 0.041.00 1.40 n/a No Hit
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Motif analysis

No data available

Genetic associations

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