rs3759279 chr12:8032544 C>T

Sequence
ggcgtgagagcggccgtggctctc[C/T]aggcggagcgcacaccgggtagcg
ASB in cell types
HEK293 (embryonic kidney) CD14+ monocytes 22RV1 (prostate carcinoma)
ASB for transcription factors
STAT1_HUMAN ANDR_HUMAN ZFHX2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.88 -5.39 1.8·10-31.00 2.00 n/a No Hit
ANDR_HUMAN 2.67 n/a 0.031.00 2.00 n/a No Hit
ZFHX2_HUMAN -1.61 2.66 1.000.03 2.00 n/a n/a
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Skin_Sun_Exposed_Lower_leg

Download