ADASTRA v5.1.3
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rs3759279
chr12:8032544
C
>
T
Sequence
ggcgtgagagcggccgtggctctc[C/T]aggcggagcgcacaccgggtagcg
ASB in cell types
HEK293 (embryonic kidney)
CD14+ monocytes
22RV1 (prostate carcinoma)
ASB for transcription factors
STAT1_HUMAN
ANDR_HUMAN
ZFHX2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.88
-5.39
1.8·10
-3
1.00
2.00
n/a
No Hit
ANDR_HUMAN
2.67
n/a
0.03
1.00
2.00
n/a
No Hit
ZFHX2_HUMAN
-1.61
2.66
1.00
0.03
2.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Cells_Cultured_fibroblasts
,
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)