rs3761246 chr20:3069689 C>A
- Sequence
ctctctgcagctgaagcaggctct[C/A]gaggagctacccctgagggccacc
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma) MS-1 (Small cell lung carcinoma) breast tumor
- ASB for transcription factors
- ITF2_HUMAN ESR1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ITF2_HUMAN | 2.32 | -2.70 | 1.75 | n/a | No Hit | |||
| ESR1_HUMAN | 2.34 | n/a | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.93 | 0.44 | 1.21 | n/a | No Hit |
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