ADASTRA v5.1.3
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rs376187700
chr2:89824710
C
>
A
Sequence
cattccaaaccattccattacatt[C/A]gattccattacataccattccatt
ASB in cell types
HepG2 (hepatoblastoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma)
0.94
-0.02
0.01
1.00
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Adrenal_Gland
,
Artery_Coronary
,
Artery_Tibial
,
Brain_Cortex
,
Breast_Mammary_Tissue
,
Colon_Transverse
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Liver
,
Lung
,
Minor_Salivary_Gland
,
Nerve_Tibial
,
Pancreas
,
Prostate
,
Small_Intestine_Terminal_Ileum
,
Spleen
,
Stomach
,
Testis
,
Thyroid
,
Vagina
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale