rs3765694 chr1:3669018 G>A
- Sequence
ccagctgccctgcagctccaggcc[G/A]gccacgctgccgcctagtttcgca
- ASB in cell types
- TMD8 (diffuse large B-cell lymphoma) SK-BR-3 (breast adenocarcinoma)
- ASB for transcription factors
- ITF2_HUMAN AP2C_HUMAN MYCN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ITF2_HUMAN | n/a | 3.22 | 2.00 | n/a | No Hit | |||
| AP2C_HUMAN | n/a | 2.41 | 2.00 | 1.61 | Weak Concordant | |||
| MYCN_HUMAN | -0.17 | 1.73 | 1.00 | -1.97 | Weak Discordant |
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Motif analysis
