rs3778956 chr7:2087880 C>G

Sequence
cgccccttagcatccaagacagca[C/G]ggcgctagcagctgaagggaaaac
ASB in cell types
RH4 (alveolar rhabdomyosarcoma)
ASB for transcription factors
MYOD1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MYOD1_HUMAN -0.72 1.54 1.000.02 1.11 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol,  homa-b,  infant head circumference,  total cholesterol,  urinary albumin-to-creatinine ratio
GTEx eQTL Artery_Coronary,  Breast_Mammary_Tissue,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Testis,  Whole_Blood

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