rs3790696 chr1:119766525 A>G
- Sequence
atgatcacaagatagtgaggcaga[A/G]tgataaatacacattatatctgac
- ASB in cell types
- HepG2 (hepatoblastoma) VCaP (prostate carcinoma) ZR-75-1 (invasive ductal carcinoma)
- ASB for transcription factors
- FOXA3_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA3_HUMAN | -2.04 | 2.44 | 1.00 | n/a | No Hit | |||
| ESR1_HUMAN | 1.09 | -0.30 | 2.29 | n/a | No Hit |
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