rs3798258 chr6:45921070 T>C

Sequence
tagcccagttacagttaggttata[T/C]gagtatgaatgaccacacaaaggc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN RUNX3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 1.12 -0.38 2.8·10-31.00 1.04 n/a n/a
RUNX3_HUMAN 2.65 -2.34 2.9·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion diabetic retinopathy in type 2 diabetes mellitus salmonella-induced pyroptosis years of education
GTEx eQTL Adipose_Subcutaneous Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Testis

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