ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs3803184
chr12:48004219
G
>
C
Sequence
catggaaagcaggcaggcaggcag[G/C]ggcgggggaagacttacggacatc
ASB in cell types
HDF(human dermal fibroblasts)
SMMC-7721 (hepatocellular carcinoma)
ASB for transcription factors
EZH2_HUMAN
PTEN_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
EZH2_HUMAN
1.82
0.35
2.9·10
-3
1.00
1.00
n/a
n/a
PTEN_HUMAN
1.87
-3.21
0.03
1.00
1.33
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
,
Brain_Cerebellum
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)