rs3804038 chr21:45973922 C>G
- Sequence
aaccccagcaccctgcggctcccg[C/G]cacggggtcgcgccctccctctga
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- CTCF_HUMAN ZBT26_HUMAN SMC3_HUMAN IKZF3_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.89 | 0.64 | 1.29 | -2.71 | Concordant | |||
| ZBT26_HUMAN | 0.80 | n/a | 4.00 | n/a | n/a | |||
| SMC3_HUMAN | -2.93 | 2.56 | 2.00 | n/a | n/a | |||
| IKZF3_HUMAN | 2.33 | n/a | 3.00 | n/a | n/a |
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Motif analysis
