rs3806321 chr1:67054400 C>T
- Sequence
ccacagactccgggtgacagtcgc[C/T]ctgcgcctgcgcacgagcacgcgc
- ASB in cell types
- K562 (myelogenous leukemia) primary B-CLL cells
- ASB for transcription factors
- NELFE_HUMAN MTA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NELFE_HUMAN | -3.23 | 1.82 | 1.50 | n/a | n/a | |||
| MTA3_HUMAN | -2.26 | 3.06 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Lung, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid