rs3809353 chr13:45120387 T>A
- Sequence
gttttaatccctcagatgcagaca[T/A]cgcggacagccacgcccactcaag
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes 22RV1 (prostate carcinoma) MOLT-4 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- FOXK2_HUMAN STAT1_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 3.96 | -0.22 | 1.00 | n/a | n/a | |||
| STAT1_HUMAN | 2.81 | n/a | 3.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.19 | -1.31 | 2.00 | n/a | No Hit |
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