rs3809983 chr18:58535536 C>A

Sequence
tgtgcgtgtcaaccccaagagaag[C/A]gtgagtcattattggaagacaact
ASB in cell types
CD14+ monocytes CHL-1 (Melanoma)
ASB for transcription factors
STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.28 0.06 3.1·10-31.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP barnes akathisia rating scale,  celiac disease,  comorbid depressive syndrome and alcohol dependence,  height,  ldl cholesterol change with statins
GTEx eQTL Artery_Tibial,  Cells_EBV-transformed_lymphocytes

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