rs3845511 chr1:246139992 C>T
- Sequence
caatgacacagttctccctttcat[C/T]aagatattcttttcatcatgtatt
- ASB in cell types
- HCT-116 (colon carcinoma) GM23248 SK-N-SH (neuroblastoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- SP1_HUMAN EZH2_HUMAN FOSL1_HUMAN GCR_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP1_HUMAN | 2.16 | -1.66 | 1.00 | n/a | No Hit | |||
| EZH2_HUMAN | 2.51 | -2.35 | 1.00 | n/a | n/a | |||
| FOSL1_HUMAN | 1.99 | -0.22 | 1.17 | n/a | No Hit | |||
| GCR_HUMAN | 0.99 | 0.94 | 1.00 | n/a | No Hit |
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