rs3847574 chr11:103295863 G>T
- Sequence
gtataaaggtcaagagctatcttt[G/T]ttccgggcccagtctcaggatgtt
- ASB in cell types
- CD34+ hematopoietic stem cells VCaP (prostate carcinoma)
- ASB for transcription factors
- TIF1B_HUMAN SUMO2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TIF1B_HUMAN | 3.27 | 0.28 | 1.50 | n/a | n/a | |||
| SUMO2_HUMAN | 1.91 | -1.36 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (geographic atrophy), fasting blood glucose, schizophrenia