rs3851365 chr3:160473448 C>A
- Sequence
ctccttattcctgcaaccagcaaa[C/A]cctcagaccccaatgttttcccag
- ASB for transcription factors
- RUNX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RUNX2_HUMAN | n/a | 2.77 | 4.00 | 2.58 | Concordant |
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Motif analysis
Genetic associations
GRASP bipolar disorder, fasting insulin, hdl cholesterol, homa-b, infant head circumference, ldl cholesterol, rheumatoid arthritis, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Hippocampus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Testis, Thyroid, Whole_Blood