rs3851920 chr1:16608409 C>T
- Sequence
tgttgcatgccaagcaaggccctg[C/T]aatgtttagggaccttgacatctt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN ZN687_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.80 | 0.22 | 3.84 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.86 | -0.08 | 3.00 | n/a | No Hit | |||
| ZN687_HUMAN | 2.38 | n/a | 2.00 | n/a | n/a | |||
| MNT_HUMAN | 1.87 | -0.53 | 3.00 | n/a | n/a | |||
| ARNT_HUMAN | 3.46 | -3.45 | 1.00 | n/a | No Hit |
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