rs3856173 chr1:20788340 G>A
- Sequence
ttcattctgctcactcccttcgtt[G/A]ttaacgtttctgttgtcttccttt
- ASB in cell types
- K562 (myelogenous leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 0.70 | 0.71 | 1.06 |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, diabetic retinopathy in type 2 diabetes mellitus, fasting insulin, hdl cholesterol, homa-ir
GTEx eQTL Artery_Aorta, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood