ADASTRA v5.1.3
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Bill Cipher
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rs38848
chr7:116691316
C
>
T
Sequence
gaaatcttaactaatagatatgtt[C/T]tcaaatgcaaagtgaaatatttaa
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma)
n/a
2.49
1.00
0.02
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Brain_Hippocampus
,
Brain_Hypothalamus
,
Brain_Nucleus_accumbens_basal_ganglia
,
Brain_Putamen_basal_ganglia
,
Brain_Spinal_cord_cervical_c-1
,
Brain_Substantia_nigra
,
Lung
,
Nerve_Tibial
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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