rs38848 chr7:116691316 C>T

Sequence
gaaatcttaactaatagatatgtt[C/T]tcaaatgcaaagtgaaatatttaa
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma) n/a 2.49 1.000.02 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Hippocampus Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1 Brain_Substantia_nigra Lung Nerve_Tibial Thyroid

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