rs3890521 chr1:16905586 C>T
- Sequence
tcagtgcagctgcaaggtcaccag[C/T]tattcttgcctcgtgagacctgtc
- ASB in cell types
- HEK293 (embryonic kidney) CAR-T cells HCT-116 (colon carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- IRF4_HUMAN SMAD2_HUMAN TIF1B_HUMAN HIRA_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IRF4_HUMAN | 2.27 | -0.22 | 1.12 | n/a | No Hit | |||
| SMAD2_HUMAN | 2.84 | -3.92 | 2.00 | n/a | No Hit | |||
| TIF1B_HUMAN | 2.99 | -5.21 | 2.00 | n/a | n/a | |||
| HIRA_HUMAN | -1.29 | 2.38 | 1.00 | n/a | n/a | |||
| HXB13_HUMAN | 2.14 | -1.28 | 2.00 | n/a | No Hit |
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