rs3909878 chr16:14020280 A>G
- Sequence
ctcttccatcctgctctacaccct[A/G]atagaatttcatcctttatttatt
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells
- ASB for transcription factors
- ESR1_HUMAN ARI1A_HUMAN CTBP1_HUMAN GATA3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 0.13 | 1.14 | 1.74 | n/a | No Hit | |||
| ARI1A_HUMAN | -0.37 | 1.17 | 1.00 | n/a | n/a | |||
| CTBP1_HUMAN | -2.98 | 1.93 | 1.50 | n/a | n/a | |||
| GATA3_HUMAN | -0.60 | 1.27 | 1.90 | n/a | No Hit |
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