rs3911611 chr4:179554445 A>G
- Sequence
taattgtgattgttcactaatgca[A/G]tctgagtggagaaggccccggaag
- ASB in cell types
- iPSC (induced pluripotent stem cells)
- ASB for transcription factors
- DUX4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| DUX4_HUMAN | 2.71 | -2.78 | 1.00 | -4.19 | Concordant |
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Motif analysis
Genetic associations
GRASP ldl cholesterol, major depressive disorder (broad definition), major depressive disorder (broad definition) (females), total cholesterol