rs3929396 chr19:18086283 G>A

Sequence
aataaataaataagtaaagtatac[G/A]gaaggatgtgcataggttatatgc
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN394_HUMAN ZN555_HUMAN ZN781_HUMAN ZN623_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN394_HUMAN n/a 3.53 1.001.1·10-9 2.00 n/a No Hit
ZN555_HUMAN n/a 3.50 1.002.3·10-8 2.00 n/a n/a
ZN781_HUMAN n/a 3.45 1.006.3·10-7 2.00 n/a n/a
ZN623_HUMAN n/a 3.05 1.005.4·10-4 2.00 n/a n/a
ZF64B_HUMAN n/a 2.92 1.008.1·10-4 2.00 n/a n/a
Items per page:
1 – 5 of 8

Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Gastroesophageal_Junction,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Whole_Blood

Download