rs393802 chr1:16614708 A>G
- Sequence
catctcttctcactactcagacca[A/G]ttctgttctgctctctctgctcca
- ASB in cell types
- CC-LP-1 (intrahepatic cholangiocarcinoma) upper lobe of left lung
- ASB for transcription factors
- HHEX_HUMAN HMGA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HHEX_HUMAN | 3.50 | -3.84 | 1.00 | n/a | n/a | |||
| HMGA2_HUMAN | 1.94 | n/a | 1.00 | n/a | n/a |
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