rs393974 chr15:90818771 C>A
- Sequence
cagctggtggggcgcacccagggg[C/A]cccgagcctggcccagaccctgct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- IKZF2_HUMAN ERG_HUMAN STAG1_HUMAN COE1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -1.46 | 1.80 | 1.00 | n/a | n/a | |||
| ERG_HUMAN | -2.29 | 1.09 | 1.33 | n/a | No Hit | |||
| STAG1_HUMAN | 0.60 | 0.94 | 1.13 | n/a | n/a | |||
| COE1_HUMAN | -0.16 | 1.51 | 1.50 | 3.45 | Concordant |
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Motif analysis
