rs39452 chr7:25093790 T>C

Sequence
ctagttaaaattttatctcatgca[T/C]tagtcaaaatgcaaatctttaggc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) H929 (plasma cell myeloma)

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.12 0.82 1.007.3·10-3 1.19
H929 (plasma cell myeloma) 2.08 -1.64 0.051.00 1.00
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Motif analysis

No data available

Genetic associations

GTEx eQTL Colon_Transverse

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