rs39519 chr8:89833814 T>G

Sequence
tccagcacaaaacagacacttaat[T/G]aatgttactttctgtttccttttg
ASB in cell types
CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN n/a 2.68 1.008.5·10-4 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hip bone mineral density (bmd) primary rhegmatogenous retinal detachment psoriasis and/or psoriatic arthritis psoriasis only (no arthritis) psoriatic arthritis sporadic creutzfeldt-jakob disease tetrology of fallot transmission distortion variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Amygdala Brain_Anterior_cingulate_cortex_BA24 Brain_Caudate_basal_ganglia Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Cortex Brain_Putamen_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Ovary Pancreas Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Whole_Blood

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