ADASTRA v5.1.3
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rs39663
chr5:34001849
G
>
A
Sequence
ttctgcaattgcctgtgtcacaag[G/A]ggtcctagtgatgaagtaatgact
ASB in cell types
22RV1 (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma)
2.48
n/a
0.05
1.00
2.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
college completion
,
height
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Tibial
,
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Cerebellar_Hemisphere
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Esophagus_Muscularis
,
Heart_Atrial_Appendage
,
Heart_Left_Ventricle
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Whole_Blood
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale