rs398041445 chr2:38726224 T>A
- Sequence
aaacaaaagtgcctttattttttt[T/A]tttttattttttttttttttgaga
- ASB in cell types
- A549 (lung carcinoma) EOL-1 (Acute myeloid leukemia) LUHMES (lund human mesencephalic cells) HUES64 (embryonic stem cells)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN SMC3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | -0.63 | 1.83 | 1.14 | n/a | n/a | |||
| CTCF_HUMAN | -0.40 | 2.37 | 1.12 | n/a | No Hit | |||
| SMC3_HUMAN | -0.77 | 1.61 | 1.00 | n/a | n/a |
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