rs40244 chr7:11450378 T>C
- Sequence
tattctcactctgcactttacacc[T/C]cttatctgaggttttagacagtgt
- ASB in cell types
- LNCaP95 prostate cancer HUVEC-C (HUVEC, umbilical vein endothelial cells)
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| LNCaP95 | -0.56 | 2.51 | 1.50 | |||
| prostate cancer | -1.29 | 1.90 | 1.00 | |||
| HUVEC-C (HUVEC, umbilical vein endothelial cells) | -1.11 | 1.72 | 3.00 |
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Motif analysis
No data available
Genetic associations
GRASP arthritis including non-rheumatoid, bipolar disorder, fasting insulin, homa-b, homa-ir, mitral annular calcium, partial epilepsy, rheumatoid arthritis, schizophrenia, sporadic creutzfeldt-jakob disease