rs40557 chr16:8355899 C>G
- Sequence
gggctgggattgcaactgaataag[C/G]ctgccctctacagggtgttttttg
- ASB in cell types
- GM02610 (Lymphoblastoid Cell Lines) HeLa (cervical adenocarcinoma) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.07 | 1.59 | 1.42 | 1.44 | Weak Concordant |
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Motif analysis
