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rs40601 chr5:34001750 A>C

Sequence
ctccagctcttcacaggcaggccc[A/C]ggtctggaattctgctgctaaaca
ASB in cell types
22RV1 (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 2.43 0.24 0.051.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP college completion comorbid depressive syndrome and alcohol dependence height triglycerides
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Cerebellar_Hemisphere Brain_Cortex Brain_Frontal_Cortex_BA9 Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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