rs41185 chr5:66864487 T>C
- Sequence
gagtagagggaagggcaggggagg[T/C]atgggaggaaagtgacatggtttg
- ASB in cell types
- GM18951 (B-cells Lymphoblastoid Cell Lines) GM19240 (B cells Lymphoblastoid Cell Lines) LNCaP (prostate carcinoma) IPSC-derived bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.85 | 0.44 | 2.51 | n/a | No Hit | |||
| STAG1_HUMAN | 2.21 | 0.31 | 2.62 | n/a | n/a |
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