rs41297686 chr1:161524337 G>C
- Sequence
ggcctggcgtagccgcccagcctc[G/C]cggctcatgccccgatctgcccga
- ASB in cell types
- 2588 (Lymphoblastoid Cell Lines) LNCaP C4-2B (prostate carcinoma) 22RV1 (prostate carcinoma) HeLa S3 (cervical adenocarcinoma)
- ASB for transcription factors
- SRBP2_HUMAN ANDR_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRBP2_HUMAN | 2.15 | -1.95 | 1.00 | n/a | No Hit | |||
| ANDR_HUMAN | 2.60 | -1.82 | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | 1.98 | 0.12 | 1.13 | n/a | n/a |
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