rs4141906 chr1:172185472 G>T
- Sequence
ctctattggaaaccattgtgggtg[G/T]ggtgcatttgtaacagagcttcac
- ASB in cell types
- HS-SY-2(Monophasic synovial sarcoma) monocyte-derived dendritic cells Ishikawa (endometrial adenocarcinoma)
- ASB for transcription factors
- SPI1_HUMAN SMCA4_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.84 | 0.35 | 1.75 | n/a | No Hit | |||
| SMCA4_HUMAN | 1.72 | 0.04 | 2.00 | n/a | n/a | |||
| FOXA1_HUMAN | -0.96 | 1.80 | 1.00 | n/a | No Hit |
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