rs4144794 chr2:232697615 C>T
- Sequence
ggccggagggagcctcctcctggg[C/T]gaggggcgctgagggccctggcgc
- ASB in cell types
- GBM39 (Human brain tumor)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.32 | 0.15 | 1.04 | -1.12 | Weak Concordant | |||
| SMC3_HUMAN | 1.66 | -1.11 | 1.00 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
